DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ei and Tspan10

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:228 Identity:55/228 - (24%)
Similarity:96/228 - (42%) Gaps:47/228 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAGGLIIAL---GVVILI 62
            :..|:..||:::.|.||:||:..|..:|.|::.|.......:..|..|....::.|   |:|:.:
Mouse    68 LSTGSNCVKYLIFLSNFLFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLGGLVVSV 132

  Fly    63 IAIFGCLAAIHEAPVRLLIYVGAVVLLI----LAQLIFLGMSSHGTKDGISGSINEGFDRLWES- 122
            :::.|||.|..|....|..|.|||:..:    ||.::.:.:.. ..:|.:..:::......|:. 
Mouse   133 VSLSGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWK-PLQDSLKYTLHAAIIHYWDDP 196

  Fly   123 ------ERNQTGALSYYESWLQCCGVNSSEDYW------------IIHHGIPSSCC--PESKCMD 167
                  ::.|.|        |||||..|.:| |            :....:|:|||  |:.    
Mouse   197 DLHFLLDQVQLG--------LQCCGAVSYQD-WQQNLYFNCSSPGVQACSLPASCCINPQE---- 248

  Fly   168 TPSRVFKTGCKAAFVKYLDDKL---LVFKIVCW 197
             ...|..|.|....:. ||..:   :||...||
Mouse   249 -DGAVVNTQCGFGALG-LDQNVAGQVVFLQGCW 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 54/221 (24%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 40/159 (25%)
oculospanin_like_LEL 171..290 CDD:239420 26/125 (21%)

Return to query results.
Submit another query.