DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tsp-5

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:216 Identity:47/216 - (21%)
Similarity:90/216 - (41%) Gaps:33/216 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLNFVFSVLGLALIAFGIF------------FLISAAE----NAVSIGK----NVAGGLIIALGV 58
            |.||:|.:|.|.||..|:.            |.::.|.    |.:|:..    .|...:.|.:|.
 Worm     9 LANFLFFILNLGLIVVGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTISIMIGG 73

  Fly    59 VILIIAIFGCLAAIHEAPVRLLIYVGAV----VLLILAQLIFLGMSSHGTKDGISGSINEGFDRL 119
            .::::...||.|....:...|.:::..|    |:.|:|.::||..:.|..::.: |...:.....
 Worm    74 CMVVLGFCGCFAVGFGSKTALSVHLVLVFIVFVVKIVAIVMFLANNDHLRREFV-GVYRDELVAN 137

  Fly   120 WESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAAFVKY 184
            :.:.......|.:..:.|:|||.|..||: :.....|:||    :|....:.|...||.......
 Worm   138 YHNNSRTKNTLDWVHTSLKCCGANGCEDF-LPAGNFPTSC----ECGTKNAVVRMEGCALITWAV 197

  Fly   185 LDD---KLLVFKIVCWLLVIG 202
            .:|   ::....::|.|:.:|
 Worm   198 FEDGTLQVAFLGLICMLIELG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 47/216 (22%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 35/157 (22%)
tetraspanin_LEL 116..191 CDD:239401 17/80 (21%)

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