DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tsp-8

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_510445.1 Gene:tsp-8 / 181567 WormBaseID:WBGene00006634 Length:282 Species:Caenorhabditis elegans


Alignment Length:274 Identity:61/274 - (22%)
Similarity:100/274 - (36%) Gaps:62/274 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATTVKHVLLLLNFVFSVLGLALIAFGIFFLIS-AAENAVSIGK------NVAGGLIIALGV 58
            ||.....::.|..|.||.|.:.|:.:...||:.|.. ||.:..::..      ...|..::..|.
 Worm     1 MGSCVNALRIVTFLFNFAFWLSGVVVFGLGIWLLFDPAASDFFALHSTHPGAFRYVGWFLVGAGA 65

  Fly    59 VILIIAIFGCLAAIHEAPVRLLIYVGAVVL---LILAQLIFLGMSSHGTKDGISGSINEGFDRLW 120
            :|:::..|||:.|.......|..:...::|   |.||..:.|.......|..:..|:.:.....:
 Worm    66 IIILVGYFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRY 130

  Fly   121 ESERNQTGALSYYESWLQCCGVNSSEDYWI---------------------IHHGI--------- 155
            .||.....|....:...:||||.:..| |:                     |.|||         
 Worm   131 SSETAFKDAFDTVQEKFECCGVKTYTD-WLSARWDAEPSTQLEVNEEDAGRIEHGIGAFGGNKGT 194

  Fly   156 -----PSSCCPE-------SKC--------MDTPSRVFKT-GCKAAFVKYLDDKLLVFKIVCWLL 199
                 |||||.|       :.|        ::|.::...| ||..|..:.:...|.:...||.:|
 Worm   195 GYGRVPSSCCNEHGKLSYPNNCGRSFSQAPLNTYAQFINTRGCADAVYESVSSSLSLIVGVCVVL 259

  Fly   200 VIGEAVGAVFGWLL 213
            .|.:.:|.|....|
 Worm   260 CIVQLLGIVLSMTL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 59/267 (22%)
tsp-8NP_510445.1 Tetraspanin 8..>151 CDD:459767 30/142 (21%)
tetraspanin_LEL 108..243 CDD:239401 27/135 (20%)

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