DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tsp-9

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:254 Identity:49/254 - (19%)
Similarity:97/254 - (38%) Gaps:70/254 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAGGL------------- 52
            |..|.:.:|.:..::||...:.|..:..|.::         .::.||....|             
 Worm     1 MVCGNSCIKLLFFVINFFICIFGALICGFSLW---------ANLDKNFGSHLSDFVRQIEGIDQK 56

  Fly    53 --------------IIALGVVILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQL---IFLGMS 100
                          ::|:|.::.::..|||..|..|:||.|.:::..:|:|...:|   :| .|:
 Worm    57 LVNEIAEYQASLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVF-AMT 120

  Fly   101 SHGTKDGISGSINEGFDR---LWESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPE 162
            :   ::....||.:...:   .:|..:|    :...::..||||..:......|..|:   |.||
 Worm   121 N---REEFVSSIQQVLKKSSATYELRKN----IKPIQNVFQCCGATAQTQNRYIQDGL---CGPE 175

  Fly   163 S-----KCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSS 216
            .     .|.|..|.:.::..::..|            |.:||:..|....:|..:|..|
 Worm   176 PLSAPVNCFDRISHMVQSWGESIVV------------VAFLLLAIELFAILFSCILCRS 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 45/243 (19%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 46/244 (19%)

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