DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and UPK1A

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_054175633.1 Gene:UPK1A / 11045 HGNCID:12577 Length:313 Species:Homo sapiens


Alignment Length:224 Identity:47/224 - (20%)
Similarity:87/224 - (38%) Gaps:58/224 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAAE------NAVSIGKNVAGGLIIAL--GVVI 60
            |:..|..:|::.|.:..:.||:|.|..|:  ::|.:      ..||...:|..|..||:  |...
Human    13 GSPVVVGLLVVGNIIILLSGLSLFAETIW--VTADQYRVYPLMGVSGKDDVFAGAWIAIFCGFSF 75

  Fly    61 LIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFL-----GMSSHGTKDGI------------ 108
            .::|.||..||:......:|.|      |:|..::::     .::|:..:|.:            
Human    76 FMVASFGVGAALCRRRSMVLTY------LVLMLIVYIFECASCITSYTHRDYMVSNPSLITKQML 134

  Fly   109 ---SGSINEG--FDRLWESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESK---- 164
               |...::|  ..|||:....:.          :|||.:...| |:.......:..||..    
Human   135 TFYSADTDQGQELTRLWDRVMIEQ----------ECCGTSGPMD-WVNFTSAFRAATPEVVFPWP 188

  Fly   165 ---CMDTPSRV--FKTGCKAAFVKYLDDK 188
               |..|.:.:  .:.||:...:.||..|
Human   189 PLCCRRTGNFIPLNEEGCRLGHMDYLFTK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 46/220 (21%)
UPK1AXP_054175633.1 Tetraspanin 25..>163 CDD:459767 32/155 (21%)
uroplakin_I_like_LEL 113..231 CDD:239409 21/116 (18%)

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