DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ei and Tspan9

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001366065.1 Gene:Tspan9 / 109246 MGIID:1924558 Length:330 Species:Mus musculus


Alignment Length:234 Identity:58/234 - (24%)
Similarity:111/234 - (47%) Gaps:18/234 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAV---SIGKNVAGGLIIALGVVILIIAIFGCL 69
            :|:.:.|.|.:|.:.|..|:..||:..:|....|.   |.....|..|:||:|.::::....|||
Mouse   100 LKYTMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCL 164

  Fly    70 AAIHEAPVRLLIYVGAVVLLILAQLI-----FLGMSSHGTKDGISGSINEGFDRLWESERN--QT 127
            .||.|....||.:...:::::||:||     |:.|..  ..:.....:.||. .|:.:|.|  ..
Mouse   165 GAIKENKCLLLSFFIVLLIILLAELILIILFFVYMDK--VNENAKQDLKEGL-LLYNTENNVGLK 226

  Fly   128 GALSYYESWLQCCGVNSSEDYWII--HHGIPSSCCPESK--C-MDTPSRVFKTGCKAAFVKYLDD 187
            .|.:..::.::||||....|::.:  .:.:|..||.|:.  | .::.:.:::|||......:.||
Mouse   227 NAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRNSTTPLWRTGCYEKVKLWFDD 291

  Fly   188 KLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQSRRNNA 226
            ...|...|...::|.:.:|..|...|:..:....::.:|
Mouse   292 NKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKYDA 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 56/220 (25%)
Tspan9NP_001366065.1 Tetraspanin 100..319 CDD:459767 57/221 (26%)
NET-5_like_LEL 196..293 CDD:239418 23/99 (23%)

Return to query results.
Submit another query.