DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and LOC101730599

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_017947977.1 Gene:LOC101730599 / 101730599 XenbaseID:XB-GENE-29084703 Length:311 Species:Xenopus tropicalis


Alignment Length:243 Identity:50/243 - (20%)
Similarity:96/243 - (39%) Gaps:60/243 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAG------GLIIALGVVILIIAIFG 67
            |..|...:.:||::||.::..||:     ||:.....:.:.|      .:::.||:::..::..|
 Frog    18 KFSLSFYSTLFSLIGLVILCIGIY-----AESERQKHRTLEGIFLAPAVILLLLGIIMFAVSFIG 77

  Fly    68 CLAAIHE--APVRLLIYVGAVV-----LLILAQLIFLGMSSHGTKDGISGSINEGFDRLWESERN 125
            .:.::.:  ..|:|..:|...:     |||:.:|:|...........|...:.:.:|.|     :
 Frog    78 MVGSLRDNILLVKLFFWVLLAIFLIELLLIIIELVFENQMKKFAHANILVGMQQYYDDL-----D 137

  Fly   126 QTGALSYYESWLQCCGVNSSEDYWIIHH------------GIPSSCCPESKCMDTPSRVFKTGCK 178
            ....:.:.:....|||.:..:| |.::.            |:|.:||...|        ...|.|
 Frog   138 FKNIMDFVQEKFSCCGGDDFKD-WKVNQYHSCNSTGPLACGVPYTCCITGK--------ESGGVK 193

  Fly   179 AAFVKY--LD-DKLLVFKIV----C------WLLVIGEAVGAVFGWLL 213
            .....|  || ::|.|..|:    |      ||   |:..|...|.:|
 Frog   194 NTLCGYQTLDKERLEVHSIIHVRGCIHAVGLWL---GDNYGVTIGLVL 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 50/243 (21%)
LOC101730599XP_017947977.1 Tetraspanin 17..>154 CDD:459767 27/145 (19%)
penumbra_like_LEL 112..230 CDD:239411 26/134 (19%)

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