DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan14

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_073776075.1 Gene:tspan14 / 751700 ZFINID:ZDB-GENE-060825-329 Length:275 Species:Danio rerio


Alignment Length:205 Identity:48/205 - (23%)
Similarity:88/205 - (42%) Gaps:40/205 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RYVLCVISGICALGGCLLIWYGAW------LLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVA 67
            :|::...:.|..|.|...|..|.|      :|..|::..|:.|.|   .:..||.|  |||..:.
Zfish    20 KYLMFSYNIIFWLAGSAFIAIGFWAWSEKGVLSDLTQVTRLHGFD---PVWGVLVV--GTVTFIL 79

  Fly    68 SIFGSVAVAKDSRVLLICYAVLLVFLLIVQI---VLVSISYAASRDFLPD----SLRQGLDDLWD 125
            ...|.|...:::..||..::.::.|:..:::   ||..:.....|:::.:    :::...||: |
Zfish    80 GFAGCVGALRENICLLKFFSGVIGFIFFLELTAAVLAFVFQGQVREWISEFFLANVKAYRDDI-D 143

  Fly   126 LQHEGNSTLNTYEEWLHCCGRNSAEDY-------------LHLEKMPPP-SCCLNRDCTKHLNLF 176
            ||    :.:::.::..||||.....|:             |..||...| |||::......||  
Zfish   144 LQ----NLIDSLQKLNHCCGAKHPNDWNMNVYFNCSNKNNLSREKCGVPFSCCISDPAVTVLN-- 202

  Fly   177 MTGCEVKFKE 186
             |.|....:|
Zfish   203 -TQCGYDVRE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 48/205 (23%)
tspan14XP_073776075.1 None

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