DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and TSPAN6

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_003261.1 Gene:TSPAN6 / 7105 HGNCID:11858 Length:245 Species:Homo sapiens


Alignment Length:246 Identity:58/246 - (23%)
Similarity:96/246 - (39%) Gaps:50/246 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGSVAV 75
            ||.:.:.|..:.|.:|:..|.|...||.....:|. :...::..|| :..||||::...||..|.
Human    20 VLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLN-EKATNVPFVL-IATGTVIILLGTFGCFAT 82

  Fly    76 AKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHE-GNSTLNTYEE 139
            .:.|..:|..||:.|..:.:|::|...:.:.                   .:|| .||..|.||:
Human    83 CRASAWMLKLYAMFLTLVFLVELVAAIVGFV-------------------FRHEIKNSFKNNYEK 128

  Fly   140 ---------------------WLHCCGRNSAEDY----LHLEKMPPPSCCLNRDCTKHLN---LF 176
                                 .|||||.....|:    .:.||..|.|||...|||...:   :.
Human   129 ALKQYNSTGDYRSHAVDKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVN 193

  Fly   177 MTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRI 227
            ..||.:|....:.::......:|:.:..|:..|......|..:|.|::..|
Human   194 NEGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQYEI 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 54/234 (23%)
TSPAN6NP_003261.1 Tetraspanin 17..235 CDD:459767 55/235 (23%)
TM4SF2_6_like_LEL 112..209 CDD:239414 25/115 (22%)

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