DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tspan11

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:256 Identity:56/256 - (21%)
Similarity:107/256 - (41%) Gaps:51/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLA--AVLCVLLGTVIVVASIF 70
            |:|:|.:.:....:||..::..|.|   :|.|:...|.:......|  |.:.:.:|.:::.....
Mouse    16 LKYLLFIFNFFFWVGGAAVMAVGIW---TLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFL 77

  Fly    71 GSVAVAKDSRVLLICYAVLLVFLLIVQI---VLVSISYAASRDFLPDSLRQGLDDLWDL-----Q 127
            |..|:.::.:..|..|..||:.:.:|::   ||..:.|..    |.|.|:      |.|     :
Mouse    78 GFGAIIREQKSCLSTYFCLLLVIFLVELVAGVLAHVYYQR----LSDELK------WHLNSTLTE 132

  Fly   128 HEG-------NSTLNTYEEWLHCCGRNSAEDYLH---------LEKMPPPSCC--LNRDCTKHL- 173
            |.|       .::::..::...|||.||:.|:.|         |.:..|.|||  :...|.:.. 
Mouse   133 HYGQPRAAEITASVDRLQQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVARCGQRAH 197

  Fly   174 --NLFMT--GCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRFY 230
              |::..  ||..|.:::|........::...:...:..|.|.||.|     :.|.:.:||
Mouse   198 PSNIYKVEGGCMAKLEQFVADHLLLMGAVGIGVACLQICGMVLTCCL-----HRRLQQQFY 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 52/241 (22%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 52/240 (22%)
CD151_like_LEL 112..220 CDD:239408 26/117 (22%)

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