DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tspan13

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:221 Identity:52/221 - (23%)
Similarity:84/221 - (38%) Gaps:45/221 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LCVISGICALGGCLLIWYGAW-----LLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFG 71
            ||.::.:..|...|||...||     |:.||    |::|          :.:.:|..:.:.::.|
Mouse    13 LCALNLLYTLVSLLLIGIAAWGIGFGLISSL----RVVG----------VVIAVGIFLFLIALVG 63

  Fly    72 SVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQG--LDDLWDLQHEGNSTL 134
            .:...|..:|||..|.::|:.:.|||..:.....|.:|:      :||  |:..|   :...|..
Mouse    64 LIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNRE------QQGQLLEVGW---NNTASAR 119

  Fly   135 NTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHSLS 199
            |..:..|:|||..|..        |..:|  ...|.|.... .:.|.....||.|........:.
Mouse   120 NDIQRNLNCCGFRSYN--------PNDTC--PASCAKSTQK-CSSCAPIIGEYAGEVLRFVGGIG 173

  Fly   200 WFLVIFEFAGSVTTCYLVDSIRNHRD 225
            .|....|..|    .:|....||.:|
Mouse   174 LFFSFTEILG----VWLTYRYRNQKD 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 48/211 (23%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 35/158 (22%)

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