DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tsp42Ea

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:235 Identity:63/235 - (26%)
Similarity:115/235 - (48%) Gaps:15/235 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWL------LDSLSEEQRMLGMDHGEDLAAVLCVL 59
            |.|...:::|:|.:.:.:|::.|.|||.:||.|      :|..:|..|       .....|..::
  Fly     1 MSCGISMVKYILFIFNLLCSICGILLIVFGALLFSKVRNMDDFAEALR-------TQQVPVTMII 58

  Fly    60 LGTVIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLW 124
            |||:|::.|.||.....::|..:.:.|::||..|:|.|:.||...:.....:| :.:...::..|
  Fly    59 LGTIILLISWFGCCGAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYL-EIMGDVVEKAW 122

  Fly   125 DLQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVG 189
            :.:...:..::..:..:.||||:...||.:..|. |||||.:.:..:...::..||:|.|.|:..
  Fly   123 NHRTSRSDYMDAIQISMKCCGRSGYTDYAYQGKF-PPSCCSDTNNCRWETVYRRGCKVTFVEFWD 186

  Fly   190 AKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRF 229
            ..:.........:...||.|.|..|.|.:||||:|.|..:
  Fly   187 RNSDIIKYAGLVIAAIEFVGFVFACCLANSIRNYRRRAEY 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 54/214 (25%)
Tsp42EaNP_525012.2 Tetraspanin 8..215 CDD:459767 55/215 (26%)

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