DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and prph2lb

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001104664.1 Gene:prph2lb / 567873 ZFINID:ZDB-GENE-041001-147 Length:359 Species:Danio rerio


Alignment Length:281 Identity:58/281 - (20%)
Similarity:98/281 - (34%) Gaps:71/281 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGS 72
            |..||.|::.:..:.|..|...|.:|...:.:.:.::..:.......::||.| |...:..:.|.
Zfish    16 LAQVLWVLNWVSVVTGVTLFSMGLFLKVEIEKRRELMSKEIDSVPNMLICVGL-TACAINFLGGK 79

  Fly    73 VAV-AKDS------RVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLW----DL 126
            :.. ..|:      ::|::.|.....|.....:|...:.|:..:| |.:||..||.|..    |.
Zfish    80 ICYDCVDTTKFLRWKLLMLPYITCTFFFTFCILVGALMCYSMRKD-LEESLYFGLRDAMRYYKDT 143

  Fly   127 QHEG----NSTLNTYEEWLHCCGRNSAEDYLHLEKMP---------------------------- 159
            ...|    ..|::..:....|||.....|:.|::.:.                            
Zfish   144 DMPGRCYIKRTMDMLQMQFQCCGNGGYRDWFHIQWISNRYLNLSNSDVVERIRSNVEGKYLIDGV 208

  Fly   160 PPSCC---LNRDCTKH-----------------LNLFMTGCEVKFKEYVGAKTANFHSLSWF-LV 203
            |.|||   ..|.|.:|                 |||...||.....|:.   |....|:... |:
Zfish   209 PFSCCGLYSPRPCIQHQITNNSAHYNYDYLKEDLNLNRRGCLQALLEHY---TQIMQSIGLIVLI 270

  Fly   204 IFEFAGSVTT--CYLVDSIRN 222
            |:.|..||.|  .||..::.|
Zfish   271 IWLFEVSVLTGVRYLQTAMEN 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 56/274 (20%)
prph2lbNP_001104664.1 Tetraspanin 16..>166 CDD:459767 30/151 (20%)
peripherin_like_LEL 119..261 CDD:239415 30/145 (21%)

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