DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan33b

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_005159085.1 Gene:tspan33b / 567512 ZFINID:ZDB-GENE-060503-607 Length:266 Species:Danio rerio


Alignment Length:207 Identity:48/207 - (23%)
Similarity:94/207 - (45%) Gaps:43/207 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 AVLCVLLGTVIVVASIFGSV-AVAKDSRVL-LICYAVLLVFLLIVQIVLVSISYA-ASRDFLPDS 115
            ||:.:::|.|:...:..|.: |:.::.|:| :..:::.||||..:.|.::...|: .:||.|.:.
Zfish    63 AVILIVVGVVMFFITFCGCIGALRENIRLLKIFSFSLTLVFLTQMAIAILGFFYSEQTRDALGEF 127

  Fly   116 LRQGL----DDLWDLQHEGNSTLNTYEEWLHCCGRNSAED-----YLHLEKMPPP--------SC 163
            :::.:    ||| |||    :.::..::...|||..:..|     |.:.....|.        ||
Zfish   128 VKKAIVHYRDDL-DLQ----NLMDYIQKEFKCCGWTNYTDWSWNPYFNCSSSNPSNERCSVPFSC 187

  Fly   164 C--------LNRDC------TKHLN----LFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGS 210
            |        :|..|      ..|||    ::..||..:...::.:....|.:|:..|.:.:.||.
Zfish   188 CTPLPRETVINSMCGFGIQTQNHLNATKSIYSVGCADRAVIWIESHLLLFGALTLGLALPQIAGI 252

  Fly   211 VTTCYLVDSIRN 222
            |.:..|:..||:
Zfish   253 VLSQILISEIRS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 45/200 (23%)
tspan33bXP_005159085.1 Tetraspanin 36..>156 CDD:459767 24/97 (25%)
penumbra_like_LEL 114..234 CDD:239411 26/124 (21%)

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