DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan4b

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:197 Identity:52/197 - (26%)
Similarity:89/197 - (45%) Gaps:31/197 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGS 72
            ::|::.|.:.|..||||.|...|.||..:.||.. .|.:......||.|.::.|.|.:|....|.
Zfish    11 VKYLMFVFNLIFWLGGCGLFGVGVWLAFTQSEFS-SLPLSFPSLSAANLLLVAGGVTMVTGFLGC 74

  Fly    73 VAVAKDSRVLLICYAVLLVFLLIVQIVLV---SISYAASRDFLPDSLRQGL------DDL---WD 125
            :...|:.:.||:.:.|:|:.|::.::||:   |:.:........|.||:|:      |.|   ||
Zfish    75 LGALKEQKCLLLTFFVILLILVLTEVVLILVLSLYHEELDKKAKDDLREGMKGYSKNDGLRKSWD 139

  Fly   126 LQHEGNSTLNTYEEWLHCCGRNSAEDYLH--LEKMPPPSCCLN--RDCTKHLNLFMTGCEVKFKE 186
                      ..:....|||.::..|:.:  .:...|.|||.|  ..| :|   :...|..|.|:
Zfish   140 ----------NMQMIFKCCGVSNHTDWHNKTTDGKLPGSCCSNDPSSC-RH---WEEPCYEKAKQ 190

  Fly   187 YV 188
            ::
Zfish   191 WL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 52/197 (26%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 52/197 (26%)
NET-5_like_LEL 108..196 CDD:239418 22/99 (22%)

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