DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan14

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001007871.1 Gene:tspan14 / 493257 XenbaseID:XB-GENE-868280 Length:270 Species:Xenopus tropicalis


Alignment Length:195 Identity:41/195 - (21%)
Similarity:85/195 - (43%) Gaps:44/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RYVLCVISGICALGGCLLIWYGAW------LLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVA 67
            :|:|...:.|..|.|.:|:..|.|      :|..:::..|:.|.|     ...|.:::|.::...
 Frog    16 KYLLFSYNIIFWLSGMVLLGVGLWAWSEKGILSDITKVTRLHGFD-----PVWLVLVVGVIMFTL 75

  Fly    68 SIFGSVAVAKDSRVLL--ICYAVLLVFLLIVQIVLVSISYA-----ASRDFLPDSLRQGLDDLWD 125
            ...|.|...:::..||  .|.|::|:|.:.:.:.:::..:.     .::||..::::...||: |
 Frog    76 GFAGCVGALRENICLLKFFCGAIVLIFFMELAVAVLAFLFQDWVKDRAKDFFENNIKSYRDDI-D 139

  Fly   126 LQHEGNSTLNTYEEWLHCCGRNSAED-----YLHLEKMPPP--------SCC--------LNRDC 169
            ||    :.:::.::...|||..|.:|     |.:.....|.        |||        :|..|
 Frog   140 LQ----NLIDSLQKANQCCGAVSPDDWDLNEYFNCSVENPSRERCGVPFSCCVPDPAQTVVNTQC 200

  Fly   170  169
             Frog   201  200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 41/195 (21%)
tspan14NP_001007871.1 Tetraspanin 16..257 CDD:459767 41/195 (21%)
TM4SF9_like_LEL 113..233 CDD:239412 19/93 (20%)

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