DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan5a

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:196 Identity:43/196 - (21%)
Similarity:84/196 - (42%) Gaps:31/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGSVAVAKDSRV 81
            |:..||..|..|....:|.::|....:.|.|     ...|.:::|.|:.:....|.:...:::..
Zfish    44 GVAFLGIGLWAWSEKGVLSNISSITDLGGFD-----PVWLFLVVGGVMFILGFAGCIGALRENTF 103

  Fly    82 LLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSL--------RQGLDDLWDLQHEGNSTLNTYE 138
            ||..::|.|..:..:::....::: ..:|::.|.|        |...||: |||    :.::..:
Zfish   104 LLKFFSVFLGIIFFLELTAGILAF-VFKDWIKDQLNFFINNNIRAYRDDI-DLQ----NLIDFTQ 162

  Fly   139 EWLHCCGRNSAEDY-LHL-----------EKMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGAK 191
            |:..|||...|:|: |::           ||...|..|..:|..:.:.....|.:|:.|.....|
Zfish   163 EYWECCGAFGADDWNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVINTQCGYDVRAKPDAEQK 227

  Fly   192 T 192
            |
Zfish   228 T 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 43/196 (22%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 43/196 (22%)
TM4SF9_like_LEL 127..247 CDD:239412 26/108 (24%)

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