DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan36

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:243 Identity:56/243 - (23%)
Similarity:105/243 - (43%) Gaps:41/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIV 65
            |.|.....:.:|.::|.|....|..|.:.|::::.|.:..:..:. |....:.|.:.:.:..|:.
Zfish     1 MDCGIITSKTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMS-DRHTLIPAAIIIGVAVVMF 64

  Fly    66 VASIFGSVAVAKDSRV-----LLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWD 125
            :....|..|..::|:|     |:|   ::|:|...|...:..|.|   |..:...|.:.::|:: 
Zfish    65 IIGFVGCCATLRESKVGLGLFLII---IMLIFAAEVTAFVFGIIY---RGRIRGDLEKSMNDVF- 122

  Fly   126 LQHEG-NS---TLNTYEEWLHCCGRNSAEDYL-------HLEKMPPPSCCLN-RDCTKHLN---- 174
            |:::| ||   .::..:..|.|||..:..|:.       |...:|...|..| ..||..|:    
Zfish   123 LKYDGLNSETHAVDYLQSQLECCGVKNQTDWTLTSWFAQHNNTVPQSCCKANMTQCTGQLSQPDL 187

  Fly   175 LFMTGCEVKFKEYVGAKTANFHSLSW-FLVIFEFA-----GSVTTCYL 216
            |...|||.|.::.:.      ..||: .|||..||     |.::.|.:
Zfish   188 LNTQGCEAKLEQVLQ------DVLSYAMLVILGFAIIKFFGMLSVCVI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 54/236 (23%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 54/236 (23%)
TM4SF8_like_LEL 103..206 CDD:239416 26/112 (23%)

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