DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan9b

DIOPT Version :9

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001002186.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:239 Species:Danio rerio


Alignment Length:244 Identity:60/244 - (24%)
Similarity:103/244 - (42%) Gaps:72/244 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWL-------------LDSLSEEQRMLGMDHGEDLAAVLCVL 59
            ::|::.:.:.:..|.||.|:..|.||             ..|||              ||.|.:.
Zfish     9 VKYMMFLFNLLFWLSGCGLLGVGIWLSVSQGSFATFSPSFPSLS--------------AANLVIT 59

  Fly    60 LGTVIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLV--------SISYAASRDFLPDSL 116
            ||:|::|....|.:...|:::.||:.:.::|:.:|:.:::|:        .:|..|.:| |.|.|
Zfish    60 LGSVVMVTGFLGCLGAIKENKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENAKQD-LKDGL 123

  Fly   117 R-------QGLDDLWDLQHEGNSTLNTYEEWLHCCGRNSAEDYLHL--EKMPPPSCCLNR--DCT 170
            |       .||.:.|::         ...|| .|||.....|:...  ||..|..||...  :|.
Zfish   124 RLYNTDNNVGLRNAWNI---------IQAEW-QCCGVTGLSDWHEALQEKSVPDRCCQEHYTECG 178

  Fly   171 KH-LNLFMT-GCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLV 217
            :: .|:|.: ||..|.:|::   ..|.|.|          |::..|.||
Zfish   179 RNTTNVFWSQGCYEKVEEWL---NDNKHLL----------GTIAMCVLV 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 60/244 (25%)
tetraspanin_LEL 109..192 CDD:239401 26/95 (27%)
tspan9bNP_001002186.1 Tetraspannin 8..230 CDD:278750 60/244 (25%)
NET-5_like_LEL 105..202 CDD:239418 28/110 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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