DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and cd9b

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_068075677.1 Gene:cd9b / 406737 ZFINID:ZDB-GENE-040426-2768 Length:231 Species:Danio rerio


Alignment Length:245 Identity:44/245 - (17%)
Similarity:91/245 - (37%) Gaps:56/245 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWL-LDSLSEEQRMLGMDHGEDL---AAVLCVLLGTVIVVAS 68
            ::|::...:.:..|.|..::..|.|| .|:.::|  ....::|:.:   ...:.::.|.|::|..
Zfish    14 IKYIIFFFNFMLWLAGTGVLAVGLWLRFDAKTKE--FFTAENGQTVFLTGVYILIVAGAVMMVVG 76

  Fly    69 IFGSVAVAKDSRVLLICYAVLLVFLLIV--QIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGN 131
            ..|.....|:|..:|   .:..:|||::  ..|...|...:::|.:          :.|:|....
Zfish    77 FLGCCGAIKESACML---GLFFMFLLVIFAAEVAAGIWGLSNKDKI----------VSDIQQFYT 128

  Fly   132 STLNTYEE---------------WLHCCGRNSAEDYLHLEKMPPPSCC---LNRDCTKH---LNL 175
            .|:..|:|               .|.|||              |....   ::..|.|.   .|:
Zfish   129 QTVKNYKESPDGPLKETLTAIHFSLQCCG--------------PTGLVTDGVSVTCPKQEGLANV 179

  Fly   176 FMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRD 225
            ..|||....::...::......:...:.:....|.:.:..|..:||..||
Zfish   180 ITTGCSSVIQDMFNSRLHVIGGVGIGIGVIMVFGMIFSMLLCCAIRRTRD 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 39/235 (17%)
cd9bXP_068075677.1 Tetraspanin 14..222 CDD:459767 40/236 (17%)
CD9_LEL 113..196 CDD:239405 17/106 (16%)

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