DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and cd81

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:237 Identity:52/237 - (21%)
Similarity:95/237 - (40%) Gaps:42/237 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TRLLRYVLCVISGICALGGCLLIWYGAW---------LLDSLSEEQRMLGMDHGEDLAAVLCVLL 60
            |:.::|:|.|.:.|..|.|.:::....|         ||....|::...|..:   :...:.:.:
 Frog     7 TKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFY---IGVYIIIAV 68

  Fly    61 GTVIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWD 125
            |.|::.....|.....::|:.||..:...||.|...: |...|....:||.:...:|....::: 
 Frog    69 GAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACE-VAAGIWGFVNRDQVSKEMRLFYSEVY- 131

  Fly   126 LQHEGNST----------LNTYEEWLHCCGRNSAEDYLHL---EKMPPPSCCLNR----DCTKHL 173
             ||....|          |..:.|.|.|||..|.:.|:.:   :..|..|..|.:    ||.:.:
 Frog   132 -QHATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVTMSITDMCPKRSNILEQITIEDCHQKI 195

  Fly   174 N-LFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTC 214
            : ||.|      |.|:....|...::   ::|.|...|:..|
 Frog   196 DVLFST------KLYLVGIAAVVVAV---IMIIEMIFSMVLC 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 51/234 (22%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 51/234 (22%)

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