Protein Alignment Tsp42Eh and rom1b

DIOPT Version :10

• Sequence 1: NP_523634.1
• Gene: Tsp42Eh / 35617
• FlyBaseID: FBgn0033129
• Length: 231
• Species: Drosophila melanogaster
• Sequence 2: NP_957308.2
• Gene: rom1b / 393989
• ZFINID: ZDB-GENE-040426-1073
• Length: 352
• Species: Danio rerio
• Alignment Length: 243
• Identity: 49/243 - (20%)
• Similarity: 83/243 - (34%)
• Gaps: 72/243 - (29%)

  Fly    12 LCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAV--LCVLLGTVIVVASIFGSVA 74
            |.::|.:....|.:....|.:|...|.....::   |..|:..|  |.:.:|...|..:|... .
Zfish    20 LWLLSWVAMFSGAVTFATGVFLKTELHRRSEVM---HSMDIHIVPNLLMAVGLASVGINICAG-K 80

  Fly    75 VAKDS---------RVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDD----LWDL 126
            |.:||         :.||:.:..|.||...:.:|.:.:|||. :..|.:||:.||.:    ..|.
Zfish    81 VCQDSLDPSRFPRWKTLLLPFFCLSVFFTSLLLVAMILSYAL-QPSLEESLKIGLKNGIRFYKDT 144

  Fly   127 QHEG----NSTLNTYEEWLHCCGRNSAEDYLHLEKMP---------------------------- 159
            ...|    ..|::..:....|||..:..|:..::.:.
Zfish   145 DTPGRCFQKETIDRLQIEFQCCGNTNYRDWFEVQWISNRYLDFTSKEVKDRVRSNVDGRYLLDGV 209

  Fly   160 PPSCC---LNRDC-----------------TKHLNLFMTGCEVKFKEY 187
            |.|||   ..|.|                 ::.|||:..||......|
Zfish   210 PFSCCNPASPRPCIQYSLLDNNAHYNYEYQSEELNLYNRGCRQALVSY 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eh	NP_523634.1	Tetraspanin	8..217	CDD:459767	49/243 (20%)
rom1b	NP_957308.2	Tetraspanin	16..>167	CDD:459767	34/151 (23%)
		peripherin_like_LEL	120..262	CDD:239415	26/139 (19%)