DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and tspan2a

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:237 Identity:50/237 - (21%)
Similarity:97/237 - (40%) Gaps:49/237 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLRYVLCVISGICALGGCLLIWYGAWL-----LDSLSEEQRMLGMDHGEDLAAVLCVLLGT--V 63
            :.::|:|.|.:.|..|.|.|::..|.||     ..||..|.     |..|:....:.:|:|.  :
Zfish     9 KCVKYLLFVFNFIFWLSGSLVLAVGLWLRFDPDTTSLLSEN-----DAPENFFIAVYILIGAGGI 68

  Fly    64 IVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQH 128
            :::...||.....::|:.||..:...|:.:...::......: .::|.:...::...:....:::
Zfish    69 MMIVGFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGF-LNKDQIIKEVQNYYESATKMEN 132

  Fly   129 EGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCL--NRDCTKHL------NLFMTGCEVKFK 185
             |....:.:...|.|||..|:          |...|.  |:||.:.:      .||:.|      
Zfish   133 -GTVITSAFHSVLDCCGTESS----------PIETCTEGNKDCVQAIEDFFNEKLFIIG------ 180

  Fly   186 EYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRI 227
             |||.      .::..:||    |.:.:..|..:|||.|:.|
Zfish   181 -YVGI------GIAGVMVI----GMIFSMVLCCAIRNSREVI 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 44/223 (20%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 45/224 (20%)

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