DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eh and Tsp47F

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_725044.1 Gene:Tsp47F / 36230 FlyBaseID:FBgn0033629 Length:239 Species:Drosophila melanogaster


Alignment Length:255 Identity:63/255 - (24%)
Similarity:106/255 - (41%) Gaps:54/255 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLA-AVLCVLLGTVIVV 66
            |...|::|||...:.:.|:.|..::..||.:|..::|....:   .|..|| .::.::.|.:|.:
  Fly     4 CGPSLIKYVLFAFNVLFAISGLGILIAGAVVLADVNEFNHFV---EGRVLAPPIVLIVTGLIIFL 65

  Fly    67 ASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAAS----------RDFLPDSLRQGLD 121
            .:..|.....|:|..|||.:||||..:.||::   ::..|||          ::.|.:|:::...
  Fly    66 IASLGCFGAIKESPTLLITFAVLLAVIFIVEL---AVGIAASVFKKDLEGMVKNSLQESIKRSNS 127

  Fly   122 D---LWDLQHEGNSTLNTYEEWLHCCGRNSAEDY--LHLEKMPPPSCC----------------- 164
            :   .||          ..::.|.|||.:|..|:  |...|..|.|||                 
  Fly   128 EDTMAWD----------NIQQKLMCCGVDSPADWRTLSANKTLPGSCCQPQYIDSTVGHCLESPA 182

  Fly   165 LNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHR 224
            |.:|     ..|..||..|.|:.:.........:...:...:..|.|..|||.:|||..|
  Fly   183 LGKD-----KYFQVGCVGKLKDRIEKNAIILIGVGIGIAFIQILGIVLACYLANSIRQER 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 56/241 (23%)
Tsp47FNP_725044.1 Tetraspanin 9..231 CDD:459767 57/242 (24%)
tetraspanin_LEL <134..205 CDD:351888 20/85 (24%)

Return to query results.
Submit another query.