DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tsp42Ep

DIOPT Version :9

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_001260759.1 Gene:Tsp42Ep / 35626 FlyBaseID:FBgn0033137 Length:250 Species:Drosophila melanogaster


Alignment Length:250 Identity:62/250 - (24%)
Similarity:94/250 - (37%) Gaps:66/250 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASI 69
            |.||..:|.::.||..:.|..|   |..:.:..:.|....          |..::||..|.:..:
  Fly    11 TGLLSNLLYMLLGIGVMSGAGL---GLQMAEPNTPEHTYF----------VKSLVLGGSICMIVM 62

  Fly    70 FGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLR-------------QGLD 121
            ||...:..:    |:|  |.|:|.:.:.|.|.: .|.....:...|||             .|||
  Fly    63 FGCYGMVAN----LLC--VNLIFTMFILIALAA-EYLQLHHYHSPSLRSPGGAWQQLELAWHGLD 120

  Fly   122 DLWDLQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSC---CLN--------RDCTKHLNL 175
            ...:|.|:       ||...||||.|.|:||..|..:.|.||   .:|        ..|.:.||.
  Fly   121 RDPELMHQ-------YEASQHCCGYNGADDYKRLHLLVPASCYQAAVNDTAQQIYPSGCLETLNR 178

  Fly   176 FMTGCEVKFKEYVGAKTANFHSLSWFLV---IFEFAGSVTTCYLVDSIRNHRDRI 227
            .....:.:.|.|:           |.:|   ||....:|....|:..:| .|.||
  Fly   179 SQRYIQHRDKLYM-----------WAIVGLEIFILLQTVALSVLLFRLR-QRQRI 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 56/238 (24%)
tetraspanin_LEL 109..192 CDD:239401 28/106 (26%)
Tsp42EpNP_001260759.1 Tetraspannin <51..213 CDD:278750 47/186 (25%)
tetraspanin_LEL 91..183 CDD:239401 27/98 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467742
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001737
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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