DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eh and Tsp42El

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster


Alignment Length:234 Identity:63/234 - (26%)
Similarity:111/234 - (47%) Gaps:21/234 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIV 65
            |.|.|..::|.|.:.:.:.|:.|.|::.:|.            ||.....|..|:..::||..|:
  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGG------------LGWGAMPDAYAIGILILGGTIL 53

  Fly    66 VASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEG 130
            |.|:||.....::|..:|..||.||:.||::.:..:.::   .:|.......|.:::.|:|:...
  Fly    54 VISLFGCCGAVRESPRMLWTYASLLLILLLLIVAFIILN---PKDVFKKYALQTVENQWELEQTK 115

  Fly   131 NSTLNTYEEWLHCCGRNSAEDYLHLE---KMPPPSCCLNRDCTKHLNLFMTGCEVKFKEYVGAKT 192
            ..:::..::..:||||:||:|||.::   ...|.|||.:..|...|||::.||.:|.:|....:.
  Fly   116 PGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEA 180

  Fly   193 ANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRIRFYN 231
            .....|.|.|:.|.....:....|.....|.|.|   ||
  Fly   181 TTLGYLEWGLLGFNAVILLLAIILAIHYTNRRRR---YN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 54/211 (26%)
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 30/136 (22%)
tetraspanin_LEL 94..178 CDD:239401 25/83 (30%)

Return to query results.
Submit another query.