DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eh and Tsp39D

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_523612.3 Gene:Tsp39D / 35405 FlyBaseID:FBgn0032943 Length:235 Species:Drosophila melanogaster


Alignment Length:243 Identity:55/243 - (22%)
Similarity:98/243 - (40%) Gaps:39/243 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGS 72
            ::|:....:.:.||.|.|:...|..:..:.:.....:. || ...|.::.:::|..:.|....|.
  Fly     9 VKYLTFFCNLLFALTGLLIFLVGGMVQLNYAHYSNFVS-DH-VWTAPIILMIVGAAVAVICFLGC 71

  Fly    73 VAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNSTLNTY 137
            ....|:|..:::.:|:|.|.:.:.:|.|....|..         ..||..:.:.|.  |||:..|
  Fly    72 CGALKESSCMILSFALLAVVIFLFEIGLGLAGYVK---------HTGLHQIMESQF--NSTMQHY 125

  Fly   138 EE-------W------LHCCGRNSAEDY--LHLEKMPPPSCC--LN----RDCTKHLNLFMT--G 179
            :|       |      |.|||.|...|:  ::.....|.:||  :|    ::||   |...|  |
  Fly   126 KERADYRDAWTLLQTELDCCGINGPNDWETVYRNSTLPAACCSVINLSEAKECT---NTHATQHG 187

  Fly   180 CEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRI 227
            |..|..|.:.:||....|:...:...:....:..|.|..|.|...|.:
  Fly   188 CLQKLLEILDSKTLILASVVLGVAGIQMLTILFACCLYRSFRRSYDHV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 51/231 (22%)
Tsp39DNP_523612.3 Tetraspanin 9..226 CDD:459767 52/232 (22%)
tetraspanin_LEL 131..>167 CDD:351888 8/35 (23%)

Return to query results.
Submit another query.