DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and cd82b

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_997828.1 Gene:cd82b / 324137 ZFINID:ZDB-GENE-030131-2857 Length:256 Species:Danio rerio


Alignment Length:247 Identity:47/247 - (19%)
Similarity:97/247 - (39%) Gaps:44/247 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RYVLCVISGICALGGCLLIWYGAWL-LDS------LSEEQRMLGMDHGEDLAAVLCVLLGTVIVV 66
            :|.|.:.:.:..:.|.:::.:|.|: |||      |.|....|      .:.|.:.:.:|::.::
Zfish    10 KYFLFLFNLLFFILGAVIMGFGLWVRLDSQSFLTVLQESSTSL------KVGAYILIGIGSLSML 68

  Fly    67 ASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGN 131
            ....|.:....:.|.||..|...|:.:||.|:....:.| ..||.|.......::.:. :.:.|:
Zfish    69 MGFLGCIGAIYEIRCLLGLYFTCLLLILIAQVTAAVLIY-FQRDLLKGETYNIVNKIL-VNYTGS 131

  Fly   132 STLNTYEE-W------LHCCGRNSAEDY------LHLEKMPPPSCCLNRD-----------C--- 169
            :  ||.|: |      :.|||.:...|:      .:..|:..|..|.|..           |   
Zfish   132 N--NTSEDAWDYIQRTMKCCGWSGQSDWKENVMIKNNSKILYPCSCRNESISGSDKQEKGFCEGL 194

  Fly   170 TKHLNLFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIR 221
            :....:|..||....::::.........:...:.:.|..|.:.:..|..|::
Zfish   195 SPQWPVFTKGCISSLEDWILRNCGVILGVCVGIAVIELLGMILSMCLCKSVQ 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 45/241 (19%)
cd82bNP_997828.1 Tetraspanin 24..243 CDD:459767 44/228 (19%)
CD37_CD82_like_LEL 106..218 CDD:239413 21/115 (18%)

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