DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and cd82a

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:275 Identity:55/275 - (20%)
Similarity:97/275 - (35%) Gaps:83/275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLL---GTVI 64
            |.| ..:|.|.:.:.|..:.|..::.:|.|:|  |..:..:..:.....:..|:..:|   |:..
Zfish     5 CIT-ATKYFLFLFNFIFFIFGATIMGFGLWIL--LDNQSLIAVLQESSVILKVVSYILIGVGSFS 66

  Fly    65 VVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFL---PDSL---------- 116
            ::....|.:....:.|.||..|...|:.:|:.| |.|||.....||.|   .|.:          
Zfish    67 MLLGFLGCLGAIYEIRCLLGLYFTCLLLILLAQ-VAVSILIYFQRDLLKTEADKIVSQVVANYPG 130

  Fly   117 -RQGLDDLWDLQHEGNSTLNTYEEWLHCCGRNSAEDY--LHLEK-----MPPPSC---------- 163
             .:..:..||.          .:..:.|||.|...|:  .|:.|     :.|.||          
Zfish   131 QNKTAEQAWDY----------LQRTMQCCGWNGRMDWDENHIIKNNTVPLYPCSCHNYSIQAPIV 185

  Fly   164 -----CLNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHSLSWF-------------LVIFEFAGS 210
                 |  :..:....::.|||    .|:||         ||.             :.:.|..|.
Zfish   186 PDNGFC--QASSSDWPIYQTGC----LEHVG---------SWLFTNYGIILGICLGVAVIELLGM 235

  Fly   211 VTTCYLVDSIRNHRD 225
            :.:..|..|:  |::
Zfish   236 IFSMGLCKSV--HQE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 50/260 (19%)
cd82aNP_997826.3 None

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