DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Eh and cd63

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:239 Identity:58/239 - (24%)
Similarity:109/239 - (45%) Gaps:36/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIF 70
            :.::|:|...:.|..|.|..||..|..:..||.....:    .|...:.::.:::|.:|...|.|
Zfish     8 KCVKYLLFFFNFIFWLCGLALIVLGILVHVSLHNTAIL----QGASGSPMVLIVVGVIIFFISFF 68

  Fly    71 GSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDL---WDLQHEGNS 132
            |.....|:::.:::.:|::|..::|.:|. ..|:....|..:.:.|.|..:.:   ::...|..:
Zfish    69 GCCGAWKENQCMVVTFAIILSLIVITEIG-AGIAGYIFRGKVNELLDQSFNTMIAGYNKTEEYRT 132

  Fly   133 TLNTYEEWLHCCGRNSAEDYLHLEK---MPPPSCCLN--RDC-----TKHLNLFMTGC----EVK 183
            ||::.::.|.|||.||:.|:::...   ..|.|||.|  ::|     ||...:::.||    |.:
Zfish   133 TLDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCCKNVTKNCGIGAMTKPTVIYLEGCQPILETR 197

  Fly   184 FKE-----YVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRN 222
            .||     .|||....|         .:..|.|..|.|..:||:
Zfish   198 IKENILWIAVGALVIGF---------VQITGIVLACILSRAIRS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 55/230 (24%)
cd63NP_955837.1 Tetraspanin 10..228 CDD:459767 56/231 (24%)
CD63_LEL 103..202 CDD:239419 26/98 (27%)

Return to query results.
Submit another query.