Protein Alignment Tsp42Eh and Tspan18

DIOPT Version :10

• Sequence 1: NP_523634.1
• Gene: Tsp42Eh / 35617
• FlyBaseID: FBgn0033129
• Length: 231
• Species: Drosophila melanogaster
• Sequence 2: NP_001101220.1
• Gene: Tspan18 / 311210
• RGDID: 1560411
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 241
• Identity: 59/241 - (24%)
• Similarity: 99/241 - (41%)
• Gaps: 53/241 - (21%)

  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGS 72
            ::|::.|.:....|||..|:..|.|:|...:..:.::..:......|.:.:.:|.::.:....|.
  Rat     9 MKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAYVVLAMGGLLFLLGFLGC 73

  Fly    73 VAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYA---------ASRDFLPDSLR---QGLDDLWD 125
            ....:::|.||     |..||.|:.|.||.:|.|         .:|:|....|.   ||.:|...
  Rat    74 CGAVRENRCLL-----LFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGDNDTDV 133

  Fly   126 LQHEGNSTLNTYEEWLHCCGRNSAEDY----------LHLEKMPPPSCC-----------LNR-D 168
            .....||.:.|:    .|||.|..||:          |..|:: |.:||           |:| :
  Rat   134 FSATWNSVMITF----GCCGVNGPEDFKLASVFRLLTLDTEEV-PKACCRREPQTRDGVVLSREE 193

  Fly   169 CTKHLNLFMT--GCEV----KFKEYV---GAKTANFHSLSWFLVIF 205
            |....|.|:.  ||..    .|:.||   ||......::..||::|
  Rat   194 CQLGRNPFINKQGCYTVILNTFETYVYLAGAFAIGVLAIELFLMVF 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eh	NP_523634.1	Tetraspanin	8..217	CDD:459767	59/241 (24%)
Tspan18	NP_001101220.1	Tetraspanin	10..245	CDD:459767	59/240 (25%)
		uroplakin_I_like_LEL	105..218	CDD:239409	28/117 (24%)