Protein Alignment Tsp42Eh and Tspan6

DIOPT Version :10

• Sequence 1: NP_523634.1
• Gene: Tsp42Eh / 35617
• FlyBaseID: FBgn0033129
• Length: 231
• Species: Drosophila melanogaster
• Sequence 2: NP_001094142.1
• Gene: Tspan6 / 302313
• RGDID: 1560160
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 236
• Identity: 58/236 - (24%)
• Similarity: 99/236 - (41%)
• Gaps: 30/236 - (12%)

  Fly    11 VLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLL--GTVIVVASIFGSV 73
            ||.:.:.|..:.|.:|:..|.|...||.....:|    .|....|..||:  ||||::...||..
  Rat    20 VLLIYTFIFWITGVILLAVGIWGKVSLENYFSLL----NEKATNVPFVLIGTGTVIILLGTFGCF 80

  Fly    74 AVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNST----- 133
            |..:.|..:|..||:.|..:.:|::|...:.: ..|..:.:|.:...:   :...|.|||
  Rat    81 ATCRASAWMLKLYAMFLTLIFLVELVAAIVGF-VFRHEIKNSFKSNYE---NALKEYNSTRDYRS 141

  Fly   134 --LNTYEEWLHCCGRNSAEDY----LHLEKMPPPSCCL------NRDCTKHLNLFMTGCEVKFKE 186
              ::..:..|||||..:..|:    .:.|...|.|||.      .||..|   :...||.:|...
  Rat   142 EAVDKIQSTLHCCGVTNYRDWKGTNYYSETGFPKSCCKLEGCYPQRDADK---VNEEGCFIKVMT 203

  Fly   187 YVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIRNHRDRI 227
            .:.::......:|:.:..|:..|......|..:|.|::..|
  Rat   204 TIESEMGVVAGISFGVACFQLIGIFLAYCLSRAITNNQYEI 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eh	NP_523634.1	Tetraspanin	8..217	CDD:459767	54/224 (24%)
Tspan6	NP_001094142.1	Tetraspanin	17..235	CDD:459767	55/225 (24%)
		TM4SF2_6_like_LEL	112..209	CDD:239414	23/103 (22%)