Protein Alignment Tsp42Eh and Tspan4

DIOPT Version :9

• Sequence 1: NP_523634.1
• Gene: Tsp42Eh / 35617
• FlyBaseID: FBgn0033129
• Length: 231
• Species: Drosophila melanogaster
• Sequence 2: XP_038963951.1
• Gene: Tspan4 / 293627
• RGDID: 1305810
• Length: 333
• Species: Rattus norvegicus
• Alignment Length: 188
• Identity: 50/188 - (26%)
• Similarity: 81/188 - (43%)
• Gaps: 39/188 - (20%)

  Fly     8 LRYVLCVISGICALGGCLLIWYGAWL------LDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVV 66
            ::|::...:.:..||||.::..|.||      ..:||.....|.       ||.|.::.||.::.
  Rat   104 VKYLMFAFNLLFWLGGCGVLGVGIWLAATQGNFATLSSSFPSLS-------AANLLIVTGTFVMA 161

  Fly    67 ASIFGSVAVAKDSRVLLICYAV--LLVFLLIVQIVLVSISYAASRD-FLPDSLRQGLDDLWDLQH 128
            ....|.:...|:::.||:.:.|  ||||||...|.::..:|:...| :....|::||       |
  Rat   162 IGFVGCIGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQDLKKGL-------H 219

  Fly   129 ----EGNSTLNTYEEW------LHCCGRNSAEDYLHLEKMP--PPSCCL--NRDCTKH 172
                |||..|.  ..|      ..|||.::..|:..:....  |.||||  :..|..|
  Rat   220 LYGTEGNVGLT--NAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSDSCGLH 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eh	NP_523634.1	Tetraspannin	8..220	CDD:278750	50/188 (27%)
		tetraspanin_LEL	109..192	CDD:239401	21/79 (27%)
Tspan4	XP_038963951.1	Tetraspannin	104..321	CDD:395265	50/188 (27%)
		NET-5_like_LEL	200..297	CDD:239418	22/85 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3882
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810