DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Cd63

DIOPT Version :9

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_008763246.1 Gene:Cd63 / 29186 RGDID:62080 Length:262 Species:Rattus norvegicus


Alignment Length:256 Identity:59/256 - (23%)
Similarity:99/256 - (38%) Gaps:63/256 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIV 65
            |.| .:.|.|||.:....||:|   ||..|..:...|  :|.:........|..|:.:.:|..:.
  Rat    31 MKC-VKFLLYVLLLAFCACAVG---LIAIGVAVQVVL--KQAITHETTAGSLLPVVIIAVGAFLF 89

  Fly    66 VASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYA----ASRDFLPDSLRQGLDDLWDL 126
            :.:..|.....|::..|:|.:|:.|..:::|::.:....|.    ...:|.....:|..:.|.| 
  Rat    90 LVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFSKSFQKQMQNYLTD- 153

  Fly   127 QHEGNST---LNTYEEWLHCCGRNSAEDYLHLEKMP-------PPSCCLNRDCTKHLNLFMTGCE 181
                |.|   |:..::...|||   |.:|...|::|       |.|||:|         ...||.
  Rat   154 ----NKTATILDKLQKENKCCG---ASNYTDWERIPGMAKDRVPDSCCIN---------ITVGCG 202

  Fly   182 VKFKEYVGAKTANFHS-------LSWF-------------LVIFEFAGSVTTCYLVDSIRN 222
            ..|||      :..|:       .:|.             :...|..|.:.:|.||.|||:
  Rat   203 NDFKE------STIHTQGCVETIAAWLRKNVLLVAGAALGIAFVEVLGIIFSCCLVKSIRS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 54/245 (22%)
tetraspanin_LEL 109..192 CDD:239401 24/92 (26%)
Cd63XP_008763246.1 Tetraspannin 33..255 CDD:278750 55/250 (22%)
ATP-synt_A <72..131 CDD:294288 11/58 (19%)
CD63_LEL 129..227 CDD:239419 27/120 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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