DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tspan7

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_062608.2 Gene:Tspan7 / 21912 MGIID:1298407 Length:249 Species:Mus musculus


Alignment Length:230 Identity:51/230 - (22%)
Similarity:92/230 - (40%) Gaps:28/230 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGS 72
            |:.:|.:.|.:..:.|.:|:..|.|...:|.....::.  .....|..:.:..||.|||..:||.
Mouse    15 LKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIA--ENSTNAPYVLIGTGTTIVVFGLFGC 77

  Fly    73 VAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNS----T 133
            .|..:.|..:|..||:.|..:.:.::| ..||....|..:.|:..:...|... .:.||.    .
Mouse    78 FATCRGSPWMLKLYAMFLSLVFLAELV-AGISGFVFRHEIKDTFLRTYTDAMQ-NYNGNDERSRA 140

  Fly   134 LNTYEEWLHCCGRNSAEDYLHLEKMP-------PPSCCLNR-DCT----KHLNLFMT-----GCE 181
            ::..:..|.|||   .::|.:....|       |||||:|. ||.    .:|.:..|     ||.
Mouse   141 VDHVQRSLSCCG---VQNYTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVAATKVNQKGCY 202

  Fly   182 VKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYL 216
            .....::.........:::.:...:..|.:..|.|
Mouse   203 DLVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 51/230 (22%)
Tspan7NP_062608.2 Tetraspanin 15..239 CDD:459767 51/230 (22%)
TM4SF2_6_like_LEL 110..213 CDD:239414 23/106 (22%)

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