DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and Tspan10

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:221 Identity:48/221 - (21%)
Similarity:92/221 - (41%) Gaps:41/221 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAA---VLCVLLGTVIVVASI 69
            ::|::.:.:.:.:|...|.:..|.|.|    ..:|..|:..|..:..   ::.||.|.|:.|.|:
Mouse    75 VKYLIFLSNFLFSLPSLLALAAGLWGL----TVKRSQGIGWGGPVPTDPMLMLVLGGLVVSVVSL 135

  Fly    70 FGSVAVAKDSRVLLICYAVLLVFLLIVQI---VLVSISYAASRDFLPDSLRQGLDDLWDLQHEGN 131
            .|.:....::..||..|...::|.|.::.   ||:...:...:|.|..:|...:...|| ..:.:
Mouse   136 SGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWKPLQDSLKYTLHAAIIHYWD-DPDLH 199

  Fly   132 STLNTYEEWLHCCGRNSAEDY---LHLE-KMP-------PPSCCLN-RDCTKHLN---------- 174
            ..|:..:..|.|||..|.:|:   |:.. ..|       |.|||:| ::....:|          
Mouse   200 FLLDQVQLGLQCCGAVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGAVVNTQCGFGALGL 264

  Fly   175 --------LFMTGCEVKFKEYVGAKT 192
                    :|:.||....:|::...|
Mouse   265 DQNVAGQVVFLQGCWPALQEWLRGNT 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 48/221 (22%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 35/154 (23%)
oculospanin_like_LEL 171..290 CDD:239420 24/119 (20%)

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