DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and TM4SF

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_308575.5 Gene:TM4SF / 1269921 VectorBaseID:AGAMI1_010988 Length:285 Species:Anopheles gambiae


Alignment Length:260 Identity:60/260 - (23%)
Similarity:97/260 - (37%) Gaps:66/260 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASI- 69
            :.|.|...::..||  ||..|: .||:||.:..:...::.....|..|    ||:|..|:..:: 
Mosquito    11 KYLVYAYVILISIC--GGAQLV-IGAFLLWTHKQYAPIVKNQFWEPFA----VLIGLGIISQALC 68

  Fly    70 -FGSVAVAKDSRVLLICY-----AVLLVFLLIVQIV-----------LVSISYAASRDFLPDSLR 117
             .|..:.::..|    ||     |.|::|::|:.:|           :|....|....|.....:
Mosquito    69 YLGWTSTSRKQR----CYLGLFCAFLVLFIVILFLVSGWSVATKAHLIVPAEVAIETSFTEFLAK 129

  Fly   118 QGLDD---LWDLQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMPPPSCCLNRDCTKHLNLFMTG 179
            ...:|   :|          |..:....|||.|...||...::|..|..|.:...||   :|.||
Mosquito   130 DNTNDQTHIW----------NRLQRDFRCCGYNGIHDYKKNKQMGFPWSCYDPIDTK---VFNTG 181

  Fly   180 CEVKFKE----------YVGAKTANFHSLSWFLVIFEFAGSVT------TCYLVDSIRNHRDRIR 228
            |...|.:          .|...:|...||..|..|     .:|      |..|.:...||..|::
Mosquito   182 CMHVFVKSIEMNMIRVAVVAVASALIQSLGIFCAI-----QLTMLLRRPTLMLPNGDNNHSVRVK 241

  Fly   229  228
            Mosquito   242  241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 56/245 (23%)
TM4SFXP_308575.5 None

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