DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and si:ch73-139j3.4

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_068074269.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:204 Identity:39/204 - (19%)
Similarity:82/204 - (40%) Gaps:35/204 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVL--CVLLGTVIVVAS 68
            ::|::...:::....:.|..:....||:|  ..::..:..:..|:::..|.  ...:|.|:|..|
Zfish     8 QILKFFFMLVNAFFVILGISIFACSAWIL--FDKDSFVSVLSSGQEVKVVAGGLFFIGLVVVGVS 70

  Fly    69 IFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNST 133
            :.|......:||..:|.|...|:.:::.|| .::......|..:...||..:|::  ::..|...
Zfish    71 LLGCAGAYFESRCFIIFYLSFLIVIILGQI-FITFVLLIRRKTIEQFLRDKVDEI--IKQYGGDE 132

  Fly   134 LNTYEEW---------LHCCGRNSAEDYLHLEKMPP-------PSCCLNRDCTKHL--------- 173
            :.|  .|         ..||||.::.::.:...:..       |..|.|..|...|         
Zfish   133 IQT--SWKLLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSCFNGTCPVILEETYSFGNG 195

  Fly   174 -NLFMTGCE 181
             ::|..|||
Zfish   196 SDVFERGCE 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 39/202 (19%)
si:ch73-139j3.4XP_068074269.1 Tetraspanin 10..237 CDD:459767 39/202 (19%)
tetraspanin_LEL 117..215 CDD:351888 19/92 (21%)

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