DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and si:ch73-139j3.4

DIOPT Version :9

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_005164654.1 Gene:si:ch73-139j3.4 / 101884436 ZFINID:ZDB-GENE-140106-202 Length:355 Species:Danio rerio


Alignment Length:204 Identity:39/204 - (19%)
Similarity:82/204 - (40%) Gaps:35/204 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RLLRYVLCVISGICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVL--CVLLGTVIVVAS 68
            ::|::...:::....:.|..:....||:|  ..::..:..:..|:::..|.  ...:|.|:|..|
Zfish     8 QILKFFFMLVNAFFVILGISIFACSAWIL--FDKDSFVSVLSSGQEVKVVAGGLFFIGLVVVGVS 70

  Fly    69 IFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGNST 133
            :.|......:||..:|.|...|:.:::.|| .::......|..:...||..:|::  ::..|...
Zfish    71 LLGCAGAYFESRCFIIFYLSFLIVIILGQI-FITFVLLIRRKTIEQFLRDKVDEI--IKQYGGDE 132

  Fly   134 LNTYEEW---------LHCCGRNSAEDYLHLEKMPP-------PSCCLNRDCTKHL--------- 173
            :.|  .|         ..||||.::.::.:...:..       |..|.|..|...|         
Zfish   133 IQT--SWKLLDSVQTSARCCGRLNSNEWRNNTVIASLGGTDIYPCSCFNGTCPVILEETYSFGNG 195

  Fly   174 -NLFMTGCE 181
             ::|..|||
Zfish   196 SDVFERGCE 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 39/202 (19%)
tetraspanin_LEL 109..192 CDD:239401 20/99 (20%)
si:ch73-139j3.4XP_005164654.1 Tetraspannin 10..237 CDD:306775 39/202 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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