DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and TSPAN1

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:XP_011538762.1 Gene:TSPAN1 / 10103 HGNCID:20657 Length:258 Species:Homo sapiens


Alignment Length:240 Identity:52/240 - (21%)
Similarity:88/240 - (36%) Gaps:51/240 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYCTTRLLRYVLCVISGICALGGCLLIWYGAWL-LDSLS--------EEQRMLGMDHGEDLAAVL 56
            |.|.: .::.::.:.:.:..|.|..|:..|.|: :|..|        ....|..::.|..|.|. 
Human     1 MQCFS-FIKTMMILFNLLIFLCGAALLAVGIWVSIDGASFLKIFGPLSSSAMQFVNVGYFLIAA- 63

  Fly    57 CVLLGTVIVVASIFGSVAVAKDSRVLLIC--YAVLLVFLLIVQIVLVSISYAA-SRDFLPDSLRQ 118
                |.|:......|......:|:..|:.  :.:||:|:..|...:|::.|.. :..||...:..
Human    64 ----GVVVFALGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVALVYTTMAEHFLTLLVVP 124

  Fly   119 GLDDLWDLQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMP--------PPSCC-------LNRD 168
            .:...:..|.:.....||..:.|.|||..:..|:   |..|        ||.||       .|..
Human   125 AIKKDYGSQEDFTQVWNTTMKGLKCCGFTNYTDF---EDSPYFKENSAFPPFCCNDNVTNTANET 186

  Fly   169 CTKHL--NLFMTGCEVKFKEY----------VGAKTANFHSLSWF 201
            |||..  :..:.||   |.:.          ||...|....|.:|
Human   187 CTKQKAHDQKVEGC---FNQLLYDIRTNAVTVGGVAAGIGGLEFF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 50/233 (21%)
TSPAN1XP_011538762.1 Tetraspanin 7..>151 CDD:459767 29/148 (20%)
uroplakin_I_like_LEL 110..212 CDD:239409 24/107 (22%)

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