DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eh and TSPAN3

DIOPT Version :10

Sequence 1:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster
Sequence 2:NP_005715.1 Gene:TSPAN3 / 10099 HGNCID:17752 Length:253 Species:Homo sapiens


Alignment Length:235 Identity:47/235 - (20%)
Similarity:100/235 - (42%) Gaps:48/235 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ICALGGCLLIWYGAWLLDSLSEEQRMLGMDHGEDLAAVLCVLLGTVIVVASIFGSVAVAKDSRVL 82
            :|.:|..:.|.|..:  |...|:...|       :.||:.:.:|.::.:..:.|..|..::||..
Human    27 LCYVGAYVFITYDDY--DHFFEDVYTL-------IPAVVIIAVGALLFIIGLIGCCATIRESRCG 82

  Fly    83 LICYAVLLVFLLIVQIVLVSISYAASRDFLPDSLRQGLDDLWDLQHEGN-----STLNTYEEWLH 142
            |..:.::|:.:.:.::|:|.:.| ..|..:.:.:.:.:..::...:..|     ..::..:..||
Human    83 LATFVIILLLVFVTEVVVVVLGY-VYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLH 146

  Fly   143 CCGRNSAEDYLHLE-------KMPPPSCCLNRDCTKHLN--------LFMTGCEV----KFKEYV 188
            |||.::..|:.:.:       :..|.|||  |:...:.|        |:..|||.    |.:|.:
Human   147 CCGIHNYSDWENTDWFKETKNQSVPLSCC--RETASNCNGSLAHPSDLYAEGCEALVVKKLQEIM 209

  Fly   189 GAKTANFHSLSWFLVIF---EFAGSVTTCYLVDSIRNHRD 225
                  .|.: |..:.|   :..|.:..|.::  .|..||
Human   210 ------MHVI-WAALAFAAIQLLGMLCACIVL--CRRSRD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EhNP_523634.1 Tetraspanin 8..217 CDD:459767 44/225 (20%)
TSPAN3NP_005715.1 Tetraspanin 9..235 CDD:459767 44/228 (19%)
TM4SF8_like_LEL 104..210 CDD:239416 21/114 (18%)

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