DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tspan11

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:244 Identity:52/244 - (21%)
Similarity:99/244 - (40%) Gaps:58/244 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FWDIILALFGLVVIGLGVHI---------IYKFEHFNTAAFVIIAVGVVVVLTALFGALGAARES 69
            ||     :.|..|:.:|:..         |.....|..:|:::|.||.:|:.|...|.....||.
Mouse    27 FW-----VGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLGFGAIIREQ 86

  Fly    70 SATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKL-WNDQPVPIKPGNQSQIASLER 133
            .:....:..:|:|:.::|::|.....|:...|       .|:| |:......:...|.:.|.:..
Mouse    87 KSCLSTYFCLLLVIFLVELVAGVLAHVYYQRL-------SDELKWHLNSTLTEHYGQPRAAEITA 144

  Fly   134 WLD-------CCGNVGPSD-----YILP--------PNSCYN------GE----SDKLNLE-GCR 167
            .:|       |||:...:|     |||.        |:||..      |:    |:...:| ||.
Mouse   145 SVDRLQQDFKCCGSNSSADWQHSAYILSQEALGRQVPDSCCKTVVARCGQRAHPSNIYKVEGGCM 209

  Fly   168 QKFLDFIADRWTTFNLVSLVLLGVELICALLAYVLANSIVNRWRRSKYY 216
            .|...|:||     :|:.:..:|:.:.|..:..::....::|..:.::|
Mouse   210 AKLEQFVAD-----HLLLMGAVGIGVACLQICGMVLTCCLHRRLQQQFY 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 48/227 (21%)
tetraspanin_LEL 95..176 CDD:239401 25/112 (22%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 50/233 (21%)
CD151_like_LEL 112..220 CDD:239408 27/119 (23%)

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