DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and PRPH2

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_000313.2 Gene:PRPH2 / 5961 HGNCID:9942 Length:346 Species:Homo sapiens


Alignment Length:305 Identity:59/305 - (19%)
Similarity:103/305 - (33%) Gaps:120/305 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WDIILALFGLVVIGLGVHIIYKFE-------------HF--NTAAFVIIAVGVV-VVLTALFG-- 61
            |..:||  |:::..||:.:  |.|             ||  |:    :|.:||: .|..:|.|  
Human    25 WFSVLA--GIIIFSLGLFL--KIELRKRSDVMNNSESHFVPNS----LIGMGVLSCVFNSLAGKI 81

  Fly    62 ---ALGAARESS---------ATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWN 114
               ||..|:.:.         |...:|.:||.::.:...|..|.|    .:.|....|...|.:.
Human    82 CYDALDPAKYARWKPWLKPYLAICVLFNIILFLVALCCFLLRGSL----ENTLGQGLKNGMKYYR 142

  Fly   115 DQPVPIKPGNQSQIASLERWLDCCGNVGPSD------------------------------YILP 149
            |...|.:...:..|..|:....||||.|..|                              |::.
Human   143 DTDTPGRCFMKKTIDMLQIEFKCCGNNGFRDWFEIQWISNRYLDFSSKEVKDRIKSNVDGRYLVD 207

  Fly   150 --PNSC----------------------YNGESDKLNL--EGCRQKFLDFIADRWTTFNLVSLVL 188
              |.||                      |:.::::|||  .|||...|.:.:....:..:|:|::
Human   208 GVPFSCCNPSSPRPCIQYQITNNSAHYSYDHQTEELNLWVRGCRAALLSYYSSLMNSMGVVTLLI 272

  Fly   189 --------LGVELICALL--------------AYVLANSIVNRWR 211
                    :|:..:...|              .::|..|:...|:
Human   273 WLFEVTITIGLRYLQTSLDGVSNPEESESESQGWLLERSVPETWK 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 56/294 (19%)
tetraspanin_LEL 95..176 CDD:239401 25/136 (18%)
PRPH2NP_000313.2 Tetraspanin 16..181 CDD:459767 40/167 (24%)
peripherin_like_LEL 120..262 CDD:239415 28/145 (19%)
Interaction with MREG. /evidence=ECO:0000250 341..346
Blue background indicates that the domain is not in the aligned region.

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