DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and prph2a

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_571641.1 Gene:prph2a / 58085 ZFINID:ZDB-GENE-000616-8 Length:345 Species:Danio rerio


Alignment Length:265 Identity:52/265 - (19%)
Similarity:91/265 - (34%) Gaps:90/265 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILALFGLVVIGLGVHIIYKFE-------------HFNTAAFVIIAVGVVVVLTALFGALG 64
            ::|..::|  |::|..:|  :.:|.|             ||  ...::|.||::......||. .
Zfish    23 MYWFSVMA--GVLVFSMG--LFFKIELRKRSELMDNNESHF--VPNILIGVGLLACCLNAFGG-K 80

  Fly    65 AARESSATSKV---------FVVILIVLVILEVLAVGFLWVFQTSL---LINVDKTFDKLWNDQP 117
            ...:|..:||.         |::..:|...|.::.....:..:..|   |....|...|.:.|..
Zfish    81 VCYDSLDSSKYAKWKSIMTPFLICCLVFNFLLIVTAAMCFAMRIPLEFTLAEGLKNGMKYYKDTD 145

  Fly   118 VPIKPGNQSQIASLERWLD-------CCGNVGPSDYILPPNSCYNGESDKLNLEGCRQKFLDF-- 173
            .|.:       ..::|.||       ||||              |...|...::....::|||  
Zfish   146 TPGR-------CYMKRTLDLMQMEFRCCGN--------------NNYKDWFEIQWVSNRYLDFSA 189

  Fly   174 --IADRWTTFNLVSLVLL-GVELIC--------ALLAYVLANSI----------VNRWRRS---- 213
              :.||.:: |:....|: ||...|        .:...:..||.          :|.|:|.    
Zfish   190 KEVKDRISS-NVDGKYLMDGVPFSCCNPSSPRPCIQQQITNNSAHYSYDHYTEDLNIWKRGCRDA 253

  Fly   214 --KYY 216
              .||
Zfish   254 LVSYY 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 44/231 (19%)
tetraspanin_LEL 95..176 CDD:239401 18/94 (19%)
prph2aNP_571641.1 Tetraspanin 16..>167 CDD:459767 30/157 (19%)
peripherin_like_LEL 120..262 CDD:239415 32/161 (20%)

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