DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tspan5

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:262 Identity:54/262 - (20%)
Similarity:97/262 - (37%) Gaps:68/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSTNVLKGFALFWDIILALFGLVVIGLG------------VHIIYKFEHFNTAAFVIIAVGVVVV 55
            |:..||:.......|.....|:..:|:|            :..|.....|: ..::.:.||.|:.
Mouse    53 CTVPVLRTAEFLVRIHSHFLGITFLGIGLWAWNEKGVLSNISSITDLGGFD-PVWLFLVVGGVMF 116

  Fly    56 LTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLW-----ND 115
            :....|.:||.||::...|.|.|.|.::..||:.|....:||:       |...|:|:     |.
Mouse   117 ILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFK-------DWIKDQLYFFINNNI 174

  Fly   116 QPVPIKPGNQSQIASLERWLDCCGNVGPSDYIL-----------------PPNSCYNGE--SDKL 161
            :........|:.|...:.:..|||..|..|:.|                 .|.||...:  .|.:
Mouse   175 RAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRERCGVPFSCCTKDPAEDVI 239

  Fly   162 NLE--------------------GCRQKFLDFIADRWTTFNLVSLVLLGVELICALLAYVLANSI 206
            |.:                    ||..:|..::.|..|   :|:.:.:|:.|: .:....||.::
Mouse   240 NTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLT---IVAGIFIGIALL-QIFGICLAQNL 300

  Fly   207 VN 208
            |:
Mouse   301 VS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 49/242 (20%)
tetraspanin_LEL 95..176 CDD:239401 22/124 (18%)
Tspan5XP_006501799.1 Tetraspanin 72..301 CDD:459767 49/240 (20%)
TM4SF9_like_LEL 156..276 CDD:239412 23/126 (18%)

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