DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tspan4b

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:233 Identity:60/233 - (25%)
Similarity:101/233 - (43%) Gaps:52/233 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILALFGLVVIGLGVHIIYKFEHFN---------TAAFVIIAVGVVVVLTALFGALGAARE 68
            :||     |.|..:.|:||.:.:....|:         :||.:::..|.|.::|...|.|||.:|
Zfish    21 IFW-----LGGCGLFGVGVWLAFTQSEFSSLPLSFPSLSAANLLLVAGGVTMVTGFLGCLGALKE 80

  Fly    69 SSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIK-----PGNQSQI 128
            .......|.|||::||:.||:.:..|.::...|    ||   |..:|....:|     .|.:...
Zfish    81 QKCLLLTFFVILLILVLTEVVLILVLSLYHEEL----DK---KAKDDLREGMKGYSKNDGLRKSW 138

  Fly   129 ASLERWLDCCGNVGPSDY-------ILP-------PNSCYNGESDKLNLEGCRQKFLDFIADRWT 179
            .:::....|||....:|:       .||       |:||.:.|      |.|.:|     |.:|.
Zfish   139 DNMQMIFKCCGVSNHTDWHNKTTDGKLPGSCCSNDPSSCRHWE------EPCYEK-----AKQWL 192

  Fly   180 TFNLVSLVLLGVEL-ICALLAYVLANSIVNRWRRSKYY 216
            ..|:.|::..||.: |..|||.|.:..:..:..|::.|
Zfish   193 LTNITSVLGFGVCIGIVQLLALVFSMLMYCQILRAEKY 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 56/215 (26%)
tetraspanin_LEL 95..176 CDD:239401 20/99 (20%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 58/223 (26%)
NET-5_like_LEL 108..196 CDD:239418 22/105 (21%)

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