DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and cd81b

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001003735.1 Gene:cd81b / 445280 ZFINID:ZDB-GENE-040808-52 Length:238 Species:Danio rerio


Alignment Length:239 Identity:61/239 - (25%)
Similarity:98/239 - (41%) Gaps:43/239 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CSTNVLKGFALFWDIILALFGLVVIGLGV---H-------IIYKFE------HFNTAAFVIIAVG 51
            || ..:|....|.:.|..|.|.|::|:.:   |       ::.:||      .|..:.:|:||:|
Zfish     6 CS-QCIKYMLFFLNFIFWLAGGVILGVALWLRHDSQTSNLLMLQFEGNQAPGTFYISVYVLIAIG 69

  Fly    52 VVVVLTALFGALGAARESSATSKVFVVILIVLVILEVLAVGFLWVF------QTSLLINVDKTFD 110
            .:::.....|..||.:||......|...|::|...|| |.| :|.|      .|.|:...|..:.
Zfish    70 AIMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACEV-AAG-IWGFINRDTISTELINFYDAAYI 132

  Fly   111 KLWNDQPVPIKPGNQSQIAS--LERW---LDCCGNVGPSDYI------LPPNSCYNGESDKLNLE 164
            |..:  ||..   ...|.||  ||.:   |||||....:|..      |.|...:  ..|.|..:
Zfish   133 KAVD--PVDT---TSRQTASKVLEVFHDNLDCCGKGDDNDLFKVVQTSLCPKKTF--PLDPLISQ 190

  Fly   165 GCRQKFLDFIADRWTTFNLVSLVLLGVELICALLAYVLANSIVN 208
            .|..|..:..:::.....|.:||:..:.:...:...||..:|.|
Zfish   191 SCHVKLRNLFSEKLHVIGLAALVIAVIMVFEMIFTMVLCCAIRN 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 55/219 (25%)
tetraspanin_LEL 95..176 CDD:239401 25/97 (26%)
cd81bNP_001003735.1 Tetraspanin 10..230 CDD:459767 57/228 (25%)

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