DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tspan9b

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_068075684.1 Gene:tspan9b / 431733 ZFINID:ZDB-GENE-040704-25 Length:337 Species:Danio rerio


Alignment Length:231 Identity:54/231 - (23%)
Similarity:102/231 - (44%) Gaps:39/231 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILALFGLVVIGLGVHIIYKFEHFNT---------AAFVIIAVGVVVVLTALFGALGAARE 68
            |||     |.|..::|:|:.:......|.|         ||.::|.:|.||::|...|.|||.:|
Zfish   117 LFW-----LSGCGLLGVGIWLSVSQGSFATFSPSFPSLSAANLVITLGSVVMVTGFLGCLGAIKE 176

  Fly    69 SSATSKVFVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFD---KLWN-DQPVPIKPGNQSQIA 129
            :......|.::|:::::.|::.:...:|:...:..|..:...   :|:| |..|.::  |...|.
Zfish   177 NKCLLLSFFIVLLIILLAELILLILFFVYTEKVSENAKQDLKDGLRLYNTDNNVGLR--NAWNII 239

  Fly   130 SLERWLDCCGNVGPSDY-------ILPPNSCYNGESD----KLNL---EGCRQKFLDFIADRWTT 180
            ..| | .|||..|.||:       .:|...|....::    ..|:   :||.:|..:::.|....
Zfish   240 QAE-W-QCCGVTGLSDWHEALQEKSVPDRCCQEHYTECGRNTTNVFWSQGCYEKVEEWLNDNKHL 302

  Fly   181 FNLVSLVLLGVELICALLAYVLANSIVNRWRRSKYY 216
            ...:::.:|.::|:....:..|...|   .|..|.|
Zfish   303 LGTIAMCVLVLQLLGMAFSMTLYQQI---HRAGKKY 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 47/213 (22%)
tetraspanin_LEL 95..176 CDD:239401 22/98 (22%)
tspan9bXP_068075684.1 Tetraspanin 107..326 CDD:459767 50/217 (23%)
NET-5_like_LEL 203..300 CDD:239418 23/100 (23%)

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