DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and Tsp86D

DIOPT Version :9

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_001262468.1 Gene:Tsp86D / 41310 FlyBaseID:FBgn0037848 Length:316 Species:Drosophila melanogaster


Alignment Length:269 Identity:63/269 - (23%)
Similarity:101/269 - (37%) Gaps:90/269 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFWDIILALFGLVVIGLGVH----------------IIYKFEHFNTAAFVIIAVGVVVVLTALFG 61
            |||     |||.:::.:||:                .||.. .||.:..:||| ||:|...:..|
  Fly    41 LFW-----LFGGLLLAIGVYAFMDKLMDGNGWLRLDTIYDV-IFNISLVMIIA-GVIVFTVSFAG 98

  Fly    62 ALGAARESSATSKVFVVILIVLVILEVLAVGFLWVF---QTSLLIN--VDKTFDKLWNDQPVPIK 121
            .|||.||::...|::.:.|::..|||:......:||   ..|.|..  .||......:|..:   
  Fly    99 CLGALRENTWLLKLYSMCLLLFFILEMSLAIICFVFPQYMNSFLEYQFTDKIIHSYRDDSDL--- 160

  Fly   122 PGNQSQIASLERWLDCCG--NVGPSDYI----------------LPPNSCYN------------- 155
               |:.|...::..:|||  |.|..|:.                :|.:.|.|             
  Fly   161 ---QNFIDFAQQEFNCCGLSNAGYQDWSKNEYFNCSSPSVERCGVPYSCCINATDISSGLVNIMC 222

  Fly   156 ----------GESDKLNLEGCRQKFLDFIADRWTTFNL--VSLVLLGVELICALLAYVLANSI-- 206
                      ..|.::...||.:     |...|...||  ::.|.||:.|:...:.| ||.::  
  Fly   223 GYGVQVRSVAAASKRIWTSGCIE-----IVRVWVERNLYVIAGVALGIALLQLFVIY-LAKTLEG 281

  Fly   207 -----VNRW 210
                 .:||
  Fly   282 QIDLQKSRW 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspannin 17..202 CDD:395265 56/248 (23%)
tetraspanin_LEL 95..176 CDD:239401 22/126 (17%)
Tsp86DNP_001262468.1 Tetraspannin 51..283 CDD:278750 55/245 (22%)
penumbra_like_LEL 132..255 CDD:239411 23/133 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442927
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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