DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Eg and tspan7

DIOPT Version :10

Sequence 1:NP_523633.1 Gene:Tsp42Eg / 35616 FlyBaseID:FBgn0033128 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_989350.1 Gene:tspan7 / 394976 XenbaseID:XB-GENE-941774 Length:249 Species:Xenopus tropicalis


Alignment Length:237 Identity:52/237 - (21%)
Similarity:97/237 - (40%) Gaps:47/237 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKGFALFWDIILALFGLVVIGLGV--------HIIYKFEHFNTAAFVIIAVGVVVVLTALFGALG 64
            ||...:.:..:..:.|::::.:||        :|....|:...|.:|:|..|..:::..|||...
 Frog    15 LKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAPYVLIGTGTTIIVFGLFGCFA 79

  Fly    65 AARESSATSKVFVVILIVLVILEVLA--VGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGNQSQ 127
            ..|.|....|::.:.|.::.:.|::|  .||::..:      :..||.:.:. :.:....||..:
 Frog    80 TCRGSPWMLKLYAMFLSLVFLAELIAGISGFVFRHE------IKDTFLRTYT-EAIQNYNGNDER 137

  Fly   128 ---IASLERWLDCCG-----NVGPSDYILP---PNSCYNGESD--------------KLNLEGCR 167
               :..::|.|.|||     |...|.|...   |:||....||              |:|..||.
 Frog   138 SQAVDDVQRSLRCCGVQYYTNWTTSLYWHDHGFPSSCCANTSDCNPQDLRNMTINFTKVNQRGCY 202

  Fly   168 QKFLDFIADRW-----TTFNLVSLVLLGVELICALLAYVLAN 204
            :....|:....     ..|.:....|:|:.|.|.|..::.||
 Frog   203 ELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFITAN 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EgNP_523633.1 Tetraspanin 17..204 CDD:459767 48/226 (21%)
tetraspanin_LEL 95..176 CDD:239401 22/105 (21%)
tspan7NP_989350.1 Tetraspanin 15..239 CDD:459767 50/230 (22%)
TM4SF2_6_like_LEL 110..213 CDD:239414 23/109 (21%)

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