Protein Alignment Tsp42Eg and rom1a

DIOPT Version :10

• Sequence 1: NP_523633.1
• Gene: Tsp42Eg / 35616
• FlyBaseID: FBgn0033128
• Length: 218
• Species: Drosophila melanogaster
• Sequence 2: NP_957088.1
• Gene: rom1a / 393767
• ZFINID: ZDB-GENE-040426-1765
• Length: 346
• Species: Danio rerio
• Alignment Length: 183
• Identity: 40/183 - (21%)
• Similarity: 68/183 - (37%)
• Gaps: 64/183 - (34%)

  Fly    76 FVVILIVLVILEVLAVGFLWVFQTSLLINVDKTFDKLWNDQPVPIKPGNQSQIASLERWLDCCGN 140
            |..::::.:||..:..|.|   :|||.|.: |...:.:.|..:|.:...:..|..|:....||||
Zfish   108 FTTLMLISIILSYIMKGSL---ETSLKIGL-KNGIRFYKDTDIPGRCFQKQTIDRLQMEFHCCGN 168

  Fly   141 VGPSD------------------------------YILP--PNSC-------------------- 153
            ....|                              |::.  |.||
Zfish   169 TDYRDWFEVQWISNRYLDFSSKEVKDRIRSNVDGRYLVDGVPFSCCNPSSPRPCIQYKITNDSAH 233

  Fly   154 --YNGESDKLNL--EGCRQKFLDFIADRWTTFNLVSLVLLGVELI-CALLAYV 201
              |..|:::|||  .|||:..:::...   ..|.:..|:|.|.|| |::|:.|
Zfish   234 YNYEHETEELNLFIHGCREALVNYFMG---LMNTIGAVVLSVFLIQCSVLSSV 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Eg	NP_523633.1	Tetraspanin	17..204	CDD:459767	40/183 (22%)
		tetraspanin_LEL	95..176	CDD:239401	26/136 (19%)
rom1a	NP_957088.1	Tetraspanin	16..>167	CDD:459767	15/62 (24%)
		peripherin_like_LEL	120..262	CDD:239415	28/148 (19%)